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Molecular Dynamics Simulation and Kinetic Study of Fluoride Binding to V21C/V66C Myoglobin with a Cytoglobin-like Disulfide Bond

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成果类型:
期刊论文
作者:
Yin, Lu-Lu;Xu, Jia-Kun;Wang, Xiao-Juan;Gao, Shu-Qin;Lin, Ying-Wu*
通讯作者:
Lin, Ying-Wu
作者机构:
[Yin, Lu-Lu; Lin, Ying-Wu; Wang, Xiao-Juan] Univ South China, Sch Chem & Chem Engn, Hengyang 4200, Peoples R China.
[Xu, Jia-Kun] Chinese Acad Fishery Sci, Pilot Natl Lab Marine Sci & Technol, Lab Marine Drugs & Prod,Key Lab Sustainable Dev P, Minist Agr & Rural Affairs,Yellow Sea Fisheries R, Qingdao 266071, Peoples R China.
[Gao, Shu-Qin; Lin, Ying-Wu] Univ South China, Lab Prot Struct & Funct, Hengyang 421001, Peoples R China.
通讯机构:
[Lin, Ying-Wu] U
Univ South China, Sch Chem & Chem Engn, Hengyang 4200, Peoples R China.
Univ South China, Lab Prot Struct & Funct, Hengyang 421001, Peoples R China.
语种:
英文
关键词:
MD simulation;disulfide bond;fluoride ion;heme proteins;protein design
期刊:
International Journal of Molecular Sciences
年:
2020
卷:
21
期:
7
基金类别:
National Natural Science Foundation of ChinaNational Natural Science Foundation of China [21977042, 31200642, 21807058]; Open Project Fund of Key Laboratory of Sustainable Development of Polar Fishery, Ministry of Agriculture and Rural Affairs of PRC [2019OPF01]
机构署名:
本校为第一且通讯机构
院系归属:
化学化工学院
摘要:
Protein design is able to create artificial proteins with advanced functions, and computer simulation plays a key role in guiding the rational design. In the absence of structural evidence for cytoglobin (Cgb) with an intramolecular disulfide bond, we recently designed a de novo disulfide bond in myoglobin (Mb) based on structural alignment (i.e., V21C/V66C Mb double mutant). To provide deep insight into the regulation role of the Cys21-Cys66 disulfide bond, we herein perform molecular dynamics (MD) simulation of the fluoride-protein complex by using a fluoride ion as a probe, which reveals de...

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